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Juxtapose: a gene-embedding approach for comparing co-expression networks

BACKGROUND: Gene co-expression networks (GCNs) are not easily comparable due to their complex structure. In this paper, we propose a tool, Juxtapose, together with similarity measures that can be utilized for comparative transcriptomics between a set of organisms. While we focus on its application t...

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Bibliographic Details
Published in:BMC Bioinformatics
Main Authors: Ovens, Katie, Maleki, Farhad, Eames, B. Frank, McQuillan, Ian
Format: Artigo
Language:Inglês
Published: BioMed Central 2021
Subjects:
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC7968242/
https://ncbi.nlm.nih.gov/pubmed/33726666
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-021-04055-1
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