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Data structures based on k-mers for querying large collections of sequencing data sets

High-throughput sequencing data sets are usually deposited in public repositories (e.g., the European Nucleotide Archive) to ensure reproducibility. As the amount of data has reached petabyte scale, repositories do not allow one to perform online sequence searches, yet, such a feature would be highl...

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Podrobná bibliografie
Vydáno v:Genome Res
Hlavní autoři: Marchet, Camille, Boucher, Christina, Puglisi, Simon J., Medvedev, Paul, Salson, Mikaël, Chikhi, Rayan
Médium: Artigo
Jazyk:Inglês
Vydáno: Cold Spring Harbor Laboratory Press 2021
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC7849385/
https://ncbi.nlm.nih.gov/pubmed/33328168
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/gr.260604.119
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