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Data structures based on k-mers for querying large collections of sequencing data sets

High-throughput sequencing data sets are usually deposited in public repositories (e.g., the European Nucleotide Archive) to ensure reproducibility. As the amount of data has reached petabyte scale, repositories do not allow one to perform online sequence searches, yet, such a feature would be highl...

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Detalhes bibliográficos
Publicado no:Genome Res
Main Authors: Marchet, Camille, Boucher, Christina, Puglisi, Simon J., Medvedev, Paul, Salson, Mikaël, Chikhi, Rayan
Formato: Artigo
Idioma:Inglês
Publicado em: Cold Spring Harbor Laboratory Press 2021
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7849385/
https://ncbi.nlm.nih.gov/pubmed/33328168
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/gr.260604.119
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