Benchmark of thirteen bioinformatic pipelines for metagenomic virus diagnostics using datasets from clinical samples

Metagenomic sequencing is increasingly being used in clinical settings for difficult to diagnose cases. The performance of viral metagenomic protocols relies to a large extent on the bioinformatic analysis. In this study, the European Society for Clinical Virology (ESCV) Network on NGS (ENNGS) initi...

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Publicado en:J Clin Virol
Autores principales: de Vries, Jutte J.C., Brown, Julianne R., Fischer, Nicole, Sidorov, Igor A., Morfopoulou, Sofia, Huang, Jiabin, Munnink, Bas B. Oude, Sayiner, Arzu, Bulgurcu, Alihan, Rodriguez, Christophe, Gricourt, Guillaume, Keyaerts, Els, Beller, Leen, Bachofen, Claudia, Kubacki, Jakub, Cordey, Samuel, Laubscher, Florian, Schmitz, Dennis, Beer, Martin, Hoeper, Dirk, Huber, Michael, Kufner, Verena, Zaheri, Maryam, Lebrand, Aitana, Papa, Anna, van Boheemen, Sander, Kroes, Aloys C.M., Breuer, Judith, Lopez-Labrador, F. Xavier, Claas, Eric C.J.
Formato: Artigo
Lenguaje:Inglês
Publicado: 2021
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Article
Acceso en línea:https://ncbi.nlm.nih.gov/pmc/articles/PMC7615111/
https://ncbi.nlm.nih.gov/pubmed/34273858
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.jcv.2021.104908
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