Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms

BACKGROUND: Tools for high throughput sequencing and de novo assembly make the analysis of transcriptomes (i.e. the suite of genes expressed in a tissue) feasible for almost any organism. Yet a challenge for biologists is that it can be difficult to assign identities to gene sequences, especially fr...

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Publicado en:BMC Bioinformatics
Autores principales: Speiser, Daniel I, Pankey, M Sabrina, Zaharoff, Alexander K, Battelle, Barbara A, Bracken-Grissom, Heather D, Breinholt, Jesse W, Bybee, Seth M, Cronin, Thomas W, Garm, Anders, Lindgren, Annie R, Patel, Nipam H, Porter, Megan L, Protas, Meredith E, Rivera, Ajna S, Serb, Jeanne M, Zigler, Kirk S, Crandall, Keith A, Oakley, Todd H
Formato: Artigo
Lenguaje:Inglês
Publicado: BioMed Central 2014
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Acceso en línea:https://ncbi.nlm.nih.gov/pmc/articles/PMC4255452/
https://ncbi.nlm.nih.gov/pubmed/25407802
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-014-0350-x
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