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A cost-aggregating integer linear program for motif finding
In the motif finding problem one seeks a set of mutually similar substrings within a collection of biological sequences. This is an important and widely-studied problem, as such shared motifs in DNA often correspond to regulatory elements. We study a combinatorial framework where the goal is to find...
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| Main Authors: | , , |
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| Format: | Artigo |
| Sprog: | Inglês |
| Udgivet: |
2011
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| Fag: | |
| Online adgang: | https://ncbi.nlm.nih.gov/pmc/articles/PMC3212737/ https://ncbi.nlm.nih.gov/pubmed/22081765 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.jda.2011.04.001 |
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