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Fine-grained parallel RNAalifold algorithm for RNA secondary structure prediction on FPGA
BACKGROUND: In the field of RNA secondary structure prediction, the RNAalifold algorithm is one of the most popular methods using free energy minimization. However, general-purpose computers including parallel computers or multi-core computers exhibit parallel efficiency of no more than 50%. Field P...
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| Главные авторы: | , , , , , |
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| Формат: | Artigo |
| Язык: | Inglês |
| Опубликовано: |
BioMed Central
2009
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| Предметы: | |
| Online-ссылка: | https://ncbi.nlm.nih.gov/pmc/articles/PMC2648794/ https://ncbi.nlm.nih.gov/pubmed/19208138 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-10-S1-S37 |
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