Fine-grained parallel RNAalifold algorithm for RNA secondary structure prediction on FPGA

BACKGROUND: In the field of RNA secondary structure prediction, the RNAalifold algorithm is one of the most popular methods using free energy minimization. However, general-purpose computers including parallel computers or multi-core computers exhibit parallel efficiency of no more than 50%. Field P...

Full description

Saved in:
Bibliographic Details
Main Authors: Xia, Fei, Dou, Yong, Zhou, Xingming, Yang, Xuejun, Xu, Jiaqing, Zhang, Yang
Format: Artigo
Language:Inglês
Published: BioMed Central 2009
Subjects:
Research
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC2648794/
https://ncbi.nlm.nih.gov/pubmed/19208138
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-10-S1-S37
Tags: Add Tag
No Tags, Be the first to tag this record!

Similar Items