Evaluation of whole-genome sequencing for outbreak detection of Verotoxigenic Escherichia coli O157:H7 from the Canadian perspective

Abstract Background Rapid and accurate identification of Verotoxigenic Escherichia coli (VTEC) O157:H7 is dependent on well-established, standardized and highly discriminatory typing methods. Currently, conventional subtyping tests for foodborne bacterial pathogen surveillance are rapidly being repl...

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Hauptverfasser: Jillian Rumore, Lorelee Tschetter, Ashley Kearney, Rima Kandar, Rachel McCormick, Matthew Walker, Christy-Lynn Peterson, Aleisha Reimer, Celine Nadon
Format: Artigo
Sprache:Inglês
Veröffentlicht: BMC 2018-12-01
Schriftenreihe:BMC Genomics
Schlagworte:
VTEC
Escherichia coli
O157:H7
Whole genome sequencing
Outbreak
wgMLST
Online Zugang:http://link.springer.com/article/10.1186/s12864-018-5243-3
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