Whole genome DNA methylation: beyond genes silencing

by Tirado-Magallanes, Roberto, Rebbani, Khadija, Lim, Ricky, Pradhan, Sriharsa, Benoukraf, Touati
Published in Oncotarget (2016)

The oncogenic E3 ligase TRIP12 suppresses epithelial–mesenchymal transition (EMT) and mesenchymal traits through ZEB1/2

by Lee, Kwok Kin, Rajagopalan, Deepa, Bhatia, Shreshtha Sailesh, Tirado-Magallanes, Roberto, Chng, Wee Joo, Jha, Sudhakar
Published in Cell Death Discov (2021)

NanoVar: accurate characterization of patients’ genomic structural variants using low-depth nanopore sequencing

by Tham, Cheng Yong, Tirado-Magallanes, Roberto, Goh, Yufen, Fullwood, Melissa J., Koh, Bryan T.H., Wang, Wilson, Ng, Chin Hin, Chng, Wee Joo, Thiery, Alexandre, Tenen, Daniel G., Benoukraf, Touati
Published in Genome Biol (2020)

BRD4 localization to lineage-specific enhancers is associated with a distinct transcription factor repertoire

by Najafova, Zeynab, Tirado-Magallanes, Roberto, Subramaniam, Malayannan, Hossan, Tareq, Schmidt, Geske, Nagarajan, Sankari, Baumgart, Simon J., Mishra, Vivek Kumar, Bedi, Upasana, Hesse, Eric, Knapp, Stefan, Hawse, John R., Johnsen, Steven A.
Published in Nucleic Acids Res (2017)

TIP60 represses activation of endogenous retroviral elements

by Rajagopalan, Deepa, Tirado-Magallanes, Roberto, Bhatia, Shreshtha Sailesh, Teo, Wen Shiun, Sian, Stephanie, Hora, Shainan, Lee, Kwok Kin, Zhang, Yanzhou, Jadhav, Shweta Pradip, Wu, Yonghui, Gan, Yunn-Hwen, Karnani, Neerja, Benoukraf, Touati, Jha, Sudhakar
Published in Nucleic Acids Res (2018)

ZNF143 mediates CTCF-bound promoter–enhancer loops required for murine hematopoietic stem and progenitor cell function

by Zhou, Qiling, Yu, Miao, Tirado-Magallanes, Roberto, Li, Bin, Kong, Lingshi, Guo, Mingrui, Tan, Zi Hui, Lee, Sanghoon, Chai, Li, Numata, Akihiko, Benoukraf, Touati, Fullwood, Melissa Jane, Osato, Motomi, Ren, Bing, Tenen, Daniel G.
Published in Nat Commun (2021)

β-Catenin–TCF/LEF signaling promotes steady-state and emergency granulopoiesis via G-CSF receptor upregulation

by Danek, Petr, Kardosova, Miroslava, Janeckova, Lucie, Karkoulia, Elena, Vanickova, Karolina, Fabisik, Matej, Lozano-Asencio, Carlos, Benoukraf, Touati, Tirado-Magallanes, Roberto, Zhou, Qiling, Burocziova, Monika, Rahmatova, Sarka, Pytlik, Robert, Brdicka, Tomas, Tenen, Daniel G., Korinek, Vladimir, Alberich-Jorda, Meritxell
Published in Blood (2020)

Lysine acetyltransferase Tip60 is required for hematopoietic stem cell maintenance

by Numata, Akihiko, Kwok, Hui Si, Zhou, Qi-Ling, Li, Jia, Tirado-Magallanes, Roberto, Angarica, Vladimir Espinosa, Hannah, Rebecca, Park, Jihye, Wang, Chelsia Qiuxia, Krishnan, Vaidehi, Rajagopalan, Deepa, Zhang, Yanzhou, Zhou, Siqin, Welner, Robert S., Osato, Motomi, Jha, Sudhakar, Bohlander, Stefan K., Göttgens, Berthold, Yang, Henry, Benoukraf, Touati, Lough, John W., Bararia, Deepak, Tenen, Daniel G.
Published in Blood (2020)