DistMap: A Toolkit for Distributed Short Read Mapping on a Hadoop Cluster

by Pandey, Ram Vinay, Schlötterer, Christian
Published 2013

CANGS: a user-friendly utility for processing and analyzing 454 GS-FLX data in biodiversity studies

by Pandey, Ram Vinay, Nolte, Viola, Schlötterer, Christian
Published 2010

PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq)

by Kofler, Robert, Pandey, Ram Vinay, Schlötterer, Christian
Published 2011

CANGS DB: a stand-alone web-based database tool for processing, managing and analyzing 454 data in biodiversity studies

by Pandey, Ram Vinay, Nolte, Viola, Boenigk, Jens, Schlötterer, Christian
Published 2011

Genome-wide patterns of natural variation reveal strong selective sweeps and ongoing genomic conflict in Drosophila mauritiana

by Nolte, Viola, Pandey, Ram Vinay, Kofler, Robert, Schlötterer, Christian
Published 2013

ClinQC: a tool for quality control and cleaning of Sanger and NGS data in clinical research

by Pandey, Ram Vinay, Pabinger, Stephan, Kriegner, Albert, Weinhäusel, Andreas
Published in BMC Bioinformatics (2016)

MutAid: Sanger and NGS Based Integrated Pipeline for Mutation Identification, Validation and Annotation in Human Molecular Genetics

by Pandey, Ram Vinay, Pabinger, Stephan, Kriegner, Albert, Weinhäusel, Andreas
Published in PLoS One (2016)

Allelic imbalance metre (Allim), a new tool for measuring allele-specific gene expression with RNA-seq data

by Pandey, Ram Vinay, Franssen, Susanne U, Futschik, Andreas, Schlötterer, Christian
Published 2013

Detecting Selective Sweeps from Pooled Next-Generation Sequencing Samples

by Boitard, Simon, Schlötterer, Christian, Nolte, Viola, Pandey, Ram Vinay, Futschik, Andreas
Published 2012

Nothing Special in the Specialist? Draft Genome Sequence of Cryomyces antarcticus, the Most Extremophilic Fungus from Antarctica

by Sterflinger, Katja, Lopandic, Ksenija, Pandey, Ram Vinay, Blasi, Barbara, Kriegner, Albert
Published 2014

Experimental evolution reveals habitat-specific fitness dynamics among Wolbachia clades in Drosophila melanogaster

by Versace, Elisabetta, Nolte, Viola, Pandey, Ram Vinay, Tobler, Ray, Schlötterer, Christian
Published in Mol Ecol (2014)

Synchrony of Eukaryotic and Prokaryotic Planktonic Communities in Three Seasonally Sampled Austrian Lakes

by Bock, Christina, Salcher, Michaela, Jensen, Manfred, Pandey, Ram Vinay, Boenigk, Jens
Published in Front Microbiol (2018)

PoPoolation DB: a user-friendly web-based database for the retrieval of natural polymorphisms in Drosophila

by Pandey, Ram Vinay, Kofler, Robert, Orozco-terWengel, Pablo, Nolte, Viola, Schlötterer, Christian
Published 2011

Intra-Specific Regulatory Variation in Drosophila pseudoobscura

by Suvorov, Anton, Nolte, Viola, Pandey, Ram Vinay, Franssen, Susanne U., Futschik, Andreas, Schlötterer, Christian
Published 2013

Contrasting seasonal niche separation between rare and abundant taxa conceals the extent of protist diversity

by NOLTE, VIOLA, PANDEY, RAM VINAY, JOST, STEFFEN, MEDINGER, RALPH, OTTENWÄLDER, BIRGIT, BOENIGK, JENS, SCHLÖTTERER, CHRISTIAN
Published 2010

Diversity in a hidden world: potential and limitation of next-generation sequencing for surveys of molecular diversity of eukaryotic microorganisms

by MEDINGER, RALPH, NOLTE, VIOLA, PANDEY, RAM VINAY, JOST, STEFFEN, OTTENWÄLDER, BIRGIT, SCHLÖTTERER, CHRISTIAN, BOENIGK, JENS
Published 2010

MSRE-HTPrimer: a high-throughput and genome-wide primer design pipeline optimized for epigenetic research

by Pandey, Ram Vinay, Walter, Pulverer, Kallmeyer, Rainer, Beikircher, Gabriel, Pabinger, Stephan, Kriegner, Albert, Weinhäusel, Andreas
Published in Clin Epigenetics (2016)

Erratum to: MSRE-HTPrimer: a high-throughput and genome-wide primer design pipeline optimized for epigenetic research

by Pandey, Ram Vinay, Pulverer, Walter, Kallmeyer, Rainer, Beikircher, Gabriel, Pabinger, Stephan, Kriegner, Albert, Weinhäusel, Andreas
Published in Clin Epigenetics (2016)

MSP-HTPrimer: a high-throughput primer design tool to improve assay design for DNA methylation analysis in epigenetics

by Pandey, Ram Vinay, Pulverer, Walter, Kallmeyer, Rainer, Beikircher, Gabriel, Pabinger, Stephan, Kriegner, Albert, Weinhäusel, Andreas
Published in Clin Epigenetics (2016)

Secondary metabolite genes encoded by potato rhizosphere microbiomes in the Andean highlands are diverse and vary with sampling site and vegetation stage

by Aleti, Gajender, Nikolić, Branislav, Brader, Günter, Pandey, Ram Vinay, Antonielli, Livio, Pfeiffer, Stefan, Oswald, Andreas, Sessitsch, Angela
Published in Sci Rep (2017)