CIDR: Ultrafast and accurate clustering through imputation for single-cell RNA-seq data

by Lin, Peijie, Troup, Michael, Ho, Joshua W. K.
Published in Genome Biol (2017)

Discovery of cell-type specific DNA motif grammar in cis-regulatory elements using random Forest

by Wang, Xin, Lin, Peijie, Ho, Joshua W. K.
Published in BMC Genomics (2018)

Estimation of the methylation pattern distribution from deep sequencing data

by Lin, Peijie, Forêt, Sylvain, Wilson, Susan R, Burden, Conrad J
Published in BMC Bioinformatics (2015)

Transcriptome analysis of human brain tissue identifies reduced expression of complement complex C1Q Genes in Rett syndrome

by Lin, Peijie, Nicholls, Laura, Assareh, Hassan, Fang, Zhiming, Amos, Timothy G., Edwards, Richard J., Assareh, Amelia A., Voineagu, Irina
Published in BMC Genomics (2016)

Impact of sequencing depth and read length on single cell RNA sequencing data of T cells

by Rizzetto, Simone, Eltahla, Auda A., Lin, Peijie, Bull, Rowena, Lloyd, Andrew R., Ho, Joshua W. K., Venturi, Vanessa, Luciani, Fabio
Published in Sci Rep (2017)