Algorithmic and analytical methods in network biology

Por Koyutürk, Mehmet
Publicado em 2010

Comprehensive Evaluation of Composite Gene Features in Cancer Outcome Prediction

Por Hou, Dezhi, Koyutürk, Mehmet
Publicado no Cancer Inform (2015)

PoCos: Population Covering Locus Sets for Risk Assessment in Complex Diseases

Por Ayati, Marzieh, Koyutürk, Mehmet
Publicado no PLoS Comput Biol (2016)

Prioritizing tests of epistasis through hierarchical representation of genomic redundancies

Por Cowman, Tyler, Koyutürk, Mehmet
Publicado no Nucleic Acids Res (2017)

Characterizing human genomic coevolution in locus-gene regulatory interactions

Por Savel, Daniel, Koyutürk, Mehmet
Publicado no BioData Min (2019)

Cross-population analysis for functional characterization of type II diabetes variants

Por Elmansy, Dalia, Koyutürk, Mehmet
Publicado no BMC Bioinformatics (2019)

Functional coherence of molecular networks in bioinformatics

Por Koyutürk, Mehmet., Subramaniam, Shankar., Grama, Ananth.
Publicado em 2012

Functional characterization and topological modularity of molecular interaction networks

Por Pandey, Jayesh, Koyutürk, Mehmet, Grama, Ananth
Publicado em 2010

Vavien: An Algorithm for Prioritizing Candidate Disease Genes Based on Topological Similarity of Proteins in Interaction Networks

Por Erten, Sinan, Bebek, Gurkan, Koyutürk, Mehmet
Publicado em 2011

Network-Based Integration of Disparate Omic Data To Identify "Silent Players" in Cancer

Por Ruffalo, Matthew, Koyutürk, Mehmet, Sharan, Roded
Publicado no PLoS Comput Biol (2015)

Drug Response Prediction as a Link Prediction Problem

Por Stanfield, Zachary, Coşkun, Mustafa, Koyutürk, Mehmet
Publicado no Sci Rep (2017)

Corrigendum: Drug Response Prediction as a Link Prediction Problem

Por Stanfield, Zachary, Coşkun, Mustafa, Koyutürk, Mehmet
Publicado no Sci Rep (2017)

Linearity of network proximity measures: implications for set-based queries and significance testing

Por Maxwell, Sean, Chance, Mark R, Koyutürk, Mehmet
Publicado no Bioinformatics (2017)

An Integrative -omics Approach to Identify Functional Sub-Networks in Human Colorectal Cancer

Por Nibbe, Rod K., Koyutürk, Mehmet, Chance, Mark R.
Publicado em 2010

Mining Electronic Health Records Data: Domestic Violence and Adverse Health Effects

Por Karakurt, Gunnur, Patel, Vishal, Whiting, Kathleen, Koyutürk, Mehmet
Publicado no J Fam Violence (2016)

The KSEA App: a web-based tool for kinase activity inference from quantitative phosphoproteomics

Por Wiredja, Danica D, Koyutürk, Mehmet, Chance, Mark R
Publicado no Bioinformatics (2017)

Integrated querying and version control of context-specific biological networks

Por Cowman, Tyler, Coşkun, Mustafa, Grama, Ananth, Koyutürk, Mehmet
Publicado no Database (Oxford) (2020)

DeepKinZero: zero-shot learning for predicting kinase–phosphosite associations involving understudied kinases

Por Deznabi, Iman, Arabaci, Busra, Koyutürk, Mehmet, Tastan, Oznur
Publicado no Bioinformatics (2020)

Co-occurrence Patterns of Intimate Partner Violence

Por Hacıaliefendioğlu, Ahmet, Yılmaz, Serhan, Koyutürk, Mehmet, Karakurt, Günnur
Publicado no Pac Symp Biocomput (2021)

DADA: Degree-Aware Algorithms for Network-Based Disease Gene Prioritization

Por Erten, Sinan, Bebek, Gurkan, Ewing, Rob M, Koyutürk, Mehmet
Publicado em 2011