Risultati della ricerca - Jennifer Pett-Ridge

Rhizosphere and detritusphere habitats modulate expression of soil N-cycling genes during plant development di Ella T. Sieradzki, Erin E. Nuccio, Jennifer Pett-Ridge, Mary K. Firestone

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Measuring Cyanobacterial Metabolism in Biofilms with NanoSIMS Isotope Imaging and Scanning Electron Microscopy (SEM) di Rhona Stuart, Xavier Mayali, Michael Thelen, Jennifer Pett-Ridge, Peter Weber

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The relationship between gene traits and transcription in soil microbial communities varies by environmental stimulus di Peter F. Chuckran, Steven J. Blazewicz, Javier A. Ceja-Navarro, Jennifer Pett-Ridge, Egbert Schwartz, Paul Dijkstra

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A subset of viruses thrives following microbial resuscitation during rewetting of a seasonally dry California grassland soil di Alexa M. Nicolas, Ella T. Sieradzki, Jennifer Pett-Ridge, Jillian F. Banfield, Michiko E. Taga, Mary K. Firestone, Steven J. Blazewicz

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VirION2: a short- and long-read sequencing and informatics workflow to study the genomic diversity of viruses in nature di Olivier Zablocki, Michelle Michelsen, Marie Burris, Natalie Solonenko, Joanna Warwick-Dugdale, Romik Ghosh, Jennifer Pett-Ridge, Matthew B. Sullivan, Ben Temperton

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Quantitative stable isotope probing (qSIP) and cross-domain networks reveal bacterial-fungal interactions in the hyphosphere di Giovana S. Slanzon, Mengting Yuan, Katerina Estera-Molina, Aaron Chew, Steve J. Blazewicz, Michael Allen, Mary K. Firestone, Jennifer Pett-Ridge, Nhu H. Nguyen

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Melanization slows the rapid movement of fungal necromass carbon and nitrogen into both bacterial and fungal decomposer communities and soils di François Maillard, Talia J. Michaud, Craig R. See, Lang C. DeLancey, Steven J. Blazewicz, Jeffrey A. Kimbrel, Jennifer Pett-Ridge, Peter G. Kennedy

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Disentangling production and persistence of extracellular virions in grassland soils with SIP-viromics di Gareth Trubl, Simon Roux, Matthew Kellom, Dariia Vyshenska, Andy Tomatsu, Kanwar Singh, Jeffrey A. Kimbrel, Emiley Eloe-Fadrosh, Rex R. Malmstrom, Jennifer Pett-Ridge, Steven J. Blazewicz

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Deep-rooted perennials alter microbial respiration and chemical composition of carbon in density fractions along soil depth profiles di Kyungjin Min, Erin Nuccio, Eric Slessarev, Megan Kan, Karis J. McFarlane, Erik Oerter, Anna Jurusik, Gregg Sanford, Kurt D Thelen, Jennifer Pett-Ridge, Asmeret Asefaw Berhe

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Reduced legacy precipitation decreases microbial community growth efficiency and alters soil organic carbon in a California grassland di Linnea K. Hernandez, Nicole DiDonato, Ljiljana Pasa-Tolic, Peter F. Chuckran, Mary K. Firestone, Ella T. Sieradzki, Mengting Maggie Yuan, Katerina Estera-Molina, Jeffrey Kimbrel, Paul Dijkstra, Jillian F. Banfield, Jennifer Pett-Ridge, Steven J. Blazewicz

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Bioenergy Cropping Reduces the Spatiotemporal Scaling of Soil Bacterial Biodiversity di Zhencheng Ye, Jialiang Kuang, Colin T. Bates, Arthur Escalas, Daliang Ning, Liyou Wu, Suo Liu, Sihang Deng, Jiesi Lei, Xiangwen Chen, Jennifer Pett‐Ridge, Malay Saha, Lauren Hale, Gangsheng Wang, Renmao Tian, Ying Fu, Yu Tang, Mary Firestone, Jizhong Zhou, Yunfeng Yang

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A standardized quantitative analysis strategy for stable isotope probing metagenomics di Dariia Vyshenska, Pranav Sampara, Kanwar Singh, Andy Tomatsu, W. Berkeley Kauffman, Erin E. Nuccio, Steven J. Blazewicz, Jennifer Pett-Ridge, Katherine B. Louie, Neha Varghese, Matthew Kellom, Alicia Clum, Robert Riley, Simon Roux, Emiley A. Eloe-Fadrosh, Ryan M. Ziels, Rex R. Malmstrom

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Quantitative Stable-Isotope Probing (qSIP) with Metagenomics Links Microbial Physiology and Activity to Soil Moisture in Mediterranean-Climate Grassland Ecosystems di Alex Greenlon, Ella Sieradzki, Olivier Zablocki, Benjamin J. Koch, Megan M. Foley, Jeffrey A. Kimbrel, Bruce A. Hungate, Steven J. Blazewicz, Erin E. Nuccio, Christine L. Sun, Aaron Chew, Cynthia-Jeanette Mancilla, Matthew B. Sullivan, Mary Firestone, Jennifer Pett-Ridge, Jillian F. Banfield

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Accelerating the development of a sustainable bioenergy portfolio through stable isotopes di Elena Blanc‐Betes, Nuria Gomez‐Casanovas, Wendy H. Yang, Janith Chandrasoma, Teresa J. Clark, Evan H. De Lucia, Charles A. Hyde, Angela D. Kent, Jennifer Pett‐Ridge, Joshua Rabinowitz, Sierra S. Raglin, Jorg Schwender, Yihui Shen, Rachel Van Allen, Adam C. vonHaden

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Assessing the Effect of a Deep‐Rooted Grass on Belowground Carbon Storage in Cultivated Land: Insights From a Multi‐Site US Study di Eric W. Slessarev, Jennifer Pett‐Ridge, Kyungjin Min, Asmeret Asefaw Berhe, Srabani Das, Randall D. Jackson, Julie D. Jastrow, Megan Kan, Sandeep Kumar, Todd Longbottom, Karis J. McFarlane, Erik Oerter, Brian K. Richards, G. Philip Robertson, Gregg R. Sanford, Erin E. Nuccio

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Continental-scale patterns of extracellular enzyme activity in the subsoil: an overlooked reservoir of microbial activity di Nicholas C Dove, Keshav Arogyaswamy, Sharon A Billings, Jon K Botthoff, Chelsea J Carey, Caitlin Cisco, Jared L DeForest, Dawson Fairbanks, Noah Fierer, Rachel E Gallery, Jason P Kaye, Kathleen A Lohse, Mia R Maltz, Emilio Mayorga, Jennifer Pett-Ridge, Wendy H Yang, Stephen C Hart, Emma L Aronson

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Branched-chain amino acid specialization drove diversification within Calditenuaceae (Caldarchaeia) and enables their cultivation di Dengxun Lai, Damon Mosier, Marike Palmer, Xavier Mayali, Juliet Johnston, Walter Saldivar, Jonathan K. Covington, Jian-Yu Jiao, Ranjani Murali, Cale O. Seymour, Lan Liu, Zheng-Shuang Hua, Wen-Jun Li, Peter K. Weber, Jennifer Pett-Ridge, Daniel R. Colman, Eric S. Boyd, Takuro Nunoura, Jeremy A. Dodsworth, Brian P. Hedlund

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From soil to sequence: filling the critical gap in genome-resolved metagenomics is essential to the future of soil microbial ecology di Winston E. Anthony, Steven D. Allison, Caitlin M. Broderick, Luciana Chavez Rodriguez, Alicia Clum, Hugh Cross, Emiley Eloe-Fadrosh, Sarah Evans, Dawson Fairbanks, Rachel Gallery, Júlia Brandão Gontijo, Jennifer Jones, Jason McDermott, Jennifer Pett-Ridge, Sydne Record, Jorge Luiz Mazza Rodrigues, William Rodriguez-Reillo, Katherine L. Shek, Tina Takacs-Vesbach, Jeffrey L. Blanchard

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Reduced methane emissions in transgenic rice genotypes are associated with altered rhizosphere microbial hydrogen cycling di Ling-Dong Shi, Maria Florencia Ercoli, Junhyeong Kim, Artur Teixeira de Araujo Junior, Katerina Estera-Molina, Subah Soni, Tracy Satomi Weitz, Alexandra M. Shigenaga, Ilija Dukovski, Rohan Sachdeva, Halbay Turumtay, Katherine B. Louie, Benjamin P. Bowen, Suzanne M. Kosina, Henrik V. Scheller, Jennifer Pett-Ridge, Daniel Segrè, Trent R. Northen, Pamela C. Ronald, Jillian F. Banfield

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Microbiome data management in action workshop: Atlanta, GA, USA, June 12–13, 2024 di Julia M. Kelliher, Mashael Aljumaah, Sarah R. Bordenstein, J. Rodney Brister, Patrick S. G. Chain, Jose Pablo Dundore-Arias, Joanne B. Emerson, Vanessa Moreira C. Fernandes, Roberto Flores, Antonio Gonzalez, Zoe A. Hansen, Eneida L. Hatcher, Scott A. Jackson, Christina A. Kellogg, Ramana Madupu, Cassandra Maria Luz Miller, Chloe Mirzayi, Ahmed M. Moustafa, Christopher Mungall, Aaron Oliver, Nonia Pariente, Jennifer Pett-Ridge, Sydne Record, Linta Reji, Anna-Louise Reysenbach, Virginia I. Rich, Lorna Richardson, Lynn M. Schriml, Reed S. Shabman, Maria A. Sierra, Matthew B. Sullivan, Punithavathi Sundaramurthy, Katherine M. Thibault, Luke R. Thompson, Scott Tighe, Ethell Vereen, Emiley A. Eloe-Fadrosh

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