The distribution, diversity, and importance of 16S rRNA gene introns in the order Thermoproteales

by Jay, Zackary J., Inskeep, William P.
Published in Biol Direct (2015)

Next-generation physiology approaches to study microbiome function at the single cell level

by Hatzenpichler, Roland, Krukenberg, Viola, Spietz, Rachel L., Jay, Zackary J.
Published in Nat Rev Microbiol (2020)

Niche specialization of novel Thaumarchaeota to oxic and hypoxic acidic geothermal springs of Yellowstone National Park

by Beam, Jacob P, Jay, Zackary J, Kozubal, Mark A, Inskeep, William P
Published 2014

The YNP Metagenome Project: Environmental Parameters Responsible for Microbial Distribution in the Yellowstone Geothermal Ecosystem

by Inskeep, William P., Jay, Zackary J., Tringe, Susannah G., Herrgård, Markus J., Rusch, Douglas B.
Published 2013

Activity-based cell sorting reveals responses of uncultured archaea and bacteria to substrate amendment

by Reichart, Nicholas J., Jay, Zackary J., Krukenberg, Viola, Parker, Albert E., Spietz, Rachel L., Hatzenpichler, Roland
Published in ISME J (2020)

Assembly and Succession of Iron Oxide Microbial Mat Communities in Acidic Geothermal Springs

by Beam, Jacob P., Bernstein, Hans C., Jay, Zackary J., Kozubal, Mark A., Jennings, Ryan deM., Tringe, Susannah G., Inskeep, William P.
Published in Front Microbiol (2016)

Novel, Deep-Branching Heterotrophic Bacterial Populations Recovered from Thermal Spring Metagenomes

by Colman, Daniel R., Jay, Zackary J., Inskeep, William P., Jennings, Ryan deM., Maas, Kendra R., Rusch, Douglas B., Takacs-Vesbach, Cristina D.
Published in Front Microbiol (2016)

Integration of Metagenomic and Stable Carbon Isotope Evidence Reveals the Extent and Mechanisms of Carbon Dioxide Fixation in High-Temperature Microbial Communities

by Jennings, Ryan de Montmollin, Moran, James J., Jay, Zackary J., Beam, Jacob P., Whitmore, Laura M., Kozubal, Mark A., Kreuzer, Helen W., Inskeep, William P.
Published in Front Microbiol (2017)

Microbial Iron Cycling in Acidic Geothermal Springs of Yellowstone National Park: Integrating Molecular Surveys, Geochemical Processes, and Isolation of Novel Fe-Active Microorgani...

by Kozubal, Mark A., Macur, Richard E., Jay, Zackary J., Beam, Jacob P., Malfatti, Stephanie A., Tringe, Susannah G., Kocar, Benjamin D., Borch, Thomas, Inskeep, William P.
Published 2012

Ecophysiology of an uncultivated lineage of Aigarchaeota from an oxic, hot spring filamentous ‘streamer' community

by Beam, Jacob P, Jay, Zackary J, Schmid, Markus C, Rusch, Douglas B, Romine, Margaret F, M Jennings, Ryan de, Kozubal, Mark A, Tringe, Susannah G, Wagner, Michael, Inskeep, William P
Published in ISME J (2016)

Phylogenetic and Functional Analysis of Metagenome Sequence from High-Temperature Archaeal Habitats Demonstrate Linkages between Metabolic Potential and Geochemistry

by Inskeep, William P., Jay, Zackary J., Herrgard, Markus J., Kozubal, Mark A., Rusch, Douglas B., Tringe, Susannah G., Macur, Richard E., Jennings, Ryan deM., Boyd, Eric S., Spear, John R., Roberto, Francisco F.
Published 2013

Community Structure and Function of High-Temperature Chlorophototrophic Microbial Mats Inhabiting Diverse Geothermal Environments

by Klatt, Christian G., Inskeep, William P., Herrgard, Markus J., Jay, Zackary J., Rusch, Douglas B.,  Tringe, Susannah G., Niki Parenteau, M., Ward, David M., Boomer, Sarah M., Bryant, Donald A.,  Miller, Scott R.
Published 2013

Geomicrobiology of sublacustrine thermal vents in Yellowstone Lake: geochemical controls on microbial community structure and function

by Inskeep, William P., Jay, Zackary J., Macur, Richard E., Clingenpeel, Scott, Tenney, Aaron, Lovalvo, David, Beam, Jacob P., Kozubal, Mark A., Shanks, W. C., Morgan, Lisa A., Kan, Jinjun, Gorby, Yuri, Yooseph, Shibu, Nealson, Kenneth
Published in Front Microbiol (2015)

Single-cell genomics of co-sorted Nanoarchaeota suggests novel putative host associations and diversification of proteins involved in symbiosis

by Jarett, Jessica K., Nayfach, Stephen, Podar, Mircea, Inskeep, William, Ivanova, Natalia N., Munson-McGee, Jacob, Schulz, Frederik, Young, Mark, Jay, Zackary J., Beam, Jacob P., Kyrpides, Nikos C., Malmstrom, Rex R., Stepanauskas, Ramunas, Woyke, Tanja
Published in Microbiome (2018)

Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages

by Takacs-Vesbach, Cristina, Inskeep, William P., Jay, Zackary J., Herrgard, Markus J., Rusch, Douglas B., Tringe, Susannah G., Kozubal, Mark A., Hamamura, Natsuko, Macur, Richard E., Fouke, Bruce W., Reysenbach, Anna-Louise, McDermott, Timothy R., Jennings, Ryan deM., Hengartner, Nicolas W., Xie, Gary
Published 2013

Metagenomes from High-Temperature Chemotrophic Systems Reveal Geochemical Controls on Microbial Community Structure and Function

by Inskeep, William P., Rusch, Douglas B., Jay, Zackary J., Herrgard, Markus J., Kozubal, Mark A., Richardson, Toby H., Macur, Richard E., Hamamura, Natsuko, Jennings, Ryan deM., Fouke, Bruce W., Reysenbach, Anna-Louise, Roberto, Frank, Young, Mark, Schwartz, Ariel, Boyd, Eric S., Badger, Jonathan H., Mathur, Eric J., Ortmann, Alice C., Bateson, Mary, Geesey, Gill, Frazier, Marvin
Published 2010

The Electron Bifurcating FixABCX Protein Complex from Azotobacter vinelandii: Generation of Low-Potential Reducing Equivalents for Nitrogenase Catalysis

by Ledbetter, Rhesa N., Costas, Amaya M. Garcia, Lubner, Carolyn E., Mulder, David W., Tokmina-Lukaszewska, Monika, Artz, Jacob H., Patterson, Angela, Magnuson, Timothy S., Jay, Zackary J., Duan, H. Diessel, Miller, Jacquelyn, Plunkett, Mary H., Hoben, John P., Barney, Brett M., Carlson, Ross P., Miller, Anne-Frances, Bothner, Brian, King, Paul W., Peters, John W., Seefeldt, Lance C.
Published in Biochemistry (2017)