An examination of phylogenetic models of substitution rate variation among lineages

by Ho, Simon Y.W.
Published 2009

A Bayesian Evaluation of Human Mitochondrial Substitution Rates

by Endicott, Phillip, Ho, Simon Y.W.
Published 2008

The Crucial Role of Calibration in Molecular Date Estimates for the Peopling of the Americas

by Ho, Simon Y.W., Endicott, Phillip
Published 2008

Prolonged decay of molecular rate estimates for metazoan mitochondrial DNA

by Molak, Martyna, Ho, Simon Y.W.
Published in PeerJ (2015)

Declining transition/transversion ratios through time reveal limitations to the accuracy of nucleotide substitution models

by Duchêne, Sebastián, Ho, Simon YW, Holmes, Edward C
Published in BMC Evol Biol (2015)

Strategies for Partitioning Clock Models in Phylogenomic Dating: Application to the Angiosperm Evolutionary Timescale

by Foster, Charles S.P., Ho, Simon Y.W.
Published in Genome Biol Evol (2017)

Elevated substitution rates estimated from ancient DNA sequences

by Ho, Simon Y.W, Kolokotronis, Sergios-Orestis, Allaby, Robin G
Published 2007

Estimating the phylogeny and divergence times of primates using a supermatrix approach

by Chatterjee, Helen J, Ho, Simon YW, Barnes, Ian, Groves, Colin
Published 2009

The impacts of drift and selection on genomic evolution in insects

by Tong, K. Jun, Duchêne, Sebastián, Lo, Nathan, Ho, Simon Y.W.
Published in PeerJ (2017)

Australian and Pacific contributions to the genetic diversity of Norfolk Island feral chickens

by Langford S, Shannan M, Kraitsek, Spiridoula, Baskerville, Bruce, Ho, Simon YW, Gongora, Jaime
Published 2013

The evolutionary history of Stomatopoda (Crustacea: Malacostraca) inferred from molecular data

by Van Der Wal, Cara, Ahyong, Shane T., Ho, Simon Y.W., Lo, Nathan
Published in PeerJ (2017)

Evaluating the Adequacy of Molecular Clock Models Using Posterior Predictive Simulations

by Duchêne, David A., Duchêne, Sebastian, Holmes, Edward C., Ho, Simon Y.W.
Published in Mol Biol Evol (2015)

The Recovery, Interpretation and Use of Ancient Pathogen Genomes

by Duchêne, Sebastián, Ho, Simon Y.W., Carmichael, Ann G., Holmes, Edward C., Poinar, Hendrik
Published in Curr Biol (2020)

Positive selection on hemagglutinin and neuraminidase genes of H1N1 influenza viruses

by Li, Wenfu, Shi, Weifeng, Qiao, Huijie, Ho, Simon YW, Luo, Arong, Zhang, Yanzhou, Zhu, Chaodong
Published 2011

Performance of criteria for selecting evolutionary models in phylogenetics: a comprehensive study based on simulated datasets

by Luo, Arong, Qiao, Huijie, Zhang, Yanzhou, Shi, Weifeng, Ho, Simon YW, Xu, Weijun, Zhang, Aibing, Zhu, Chaodong
Published 2010

Potential efficacy of mitochondrial genes for animal DNA barcoding: a case study using eutherian mammals

by Shi Weifeng, Zhang Yanzhou, Xu Weijun, Ho Simon YW, Zhang Aibing, Luo Arong, Cameron Stephen L, Zhu Chaodong
Published 2011-01-01

Potential efficacy of mitochondrial genes for animal DNA barcoding: a case study using eutherian mammals

by Luo, Arong, Zhang, Aibing, Ho, Simon YW, Xu, Weijun, Zhang, Yanzhou, Shi, Weifeng, Cameron, Stephen L, Zhu, Chaodong
Published 2011

Revealing the maternal demographic history of Panthera leo using ancient DNA and a spatially explicit genealogical analysis

by Barnett, Ross, Yamaguchi, Nobuyuki, Shapiro, Beth, Ho, Simon YW, Barnes, Ian, Sabin, Richard, Werdelin, Lars, Cuisin, Jacques, Larson, Greger
Published 2014

Correlating Bayesian date estimates with climatic events and domestication using a bovine case study

by Ho, Simon Y.W, Larson, Greger, Edwards, Ceiridwen J, Heupink, Tim H, Lakin, Kay E, Holland, Peter W.H, Shapiro, Beth
Published 2008

Genomic Characterization of a South American Phytophthora Hybrid Mandates Reassessment of the Geographic Origins of Phytophthora infestans

by Martin, Michael D., Vieira, Filipe G., Ho, Simon Y.W., Wales, Nathan, Schubert, Mikkel, Seguin-Orlando, Andaine, Ristaino, Jean B., Gilbert, M. Thomas P.
Published in Mol Biol Evol (2016)