Infectious diseases epidemic threats and mass gatherings: refocusing global attention on the continuing spread of the Middle East Respiratory syndrome coronavirus (MERS-CoV)

Por Zumla, Alimuddin, Alagaili, Abdulaziz N., Cotten, Matthew, Azhar, Esam I.
Publicado no BMC Med (2016)

Complete Genome Characterization of Two Wild-Type Measles Viruses from Vietnamese Infants during the 2014 Outbreak

Por Oude Munnink, Bas B., Phan, My V. T., Kellam, Paul, Cotten, Matthew
Publicado no Genome Announc (2016)

Genome Sequences of a Novel Vietnamese Bat Bunyavirus

Por Oude Munnink, Bas B., Phan, My V. T., van der Hoek, Lia, Kellam, Paul, Cotten, Matthew
Publicado no Genome Announc (2016)

Universal Amplification, Next-Generation Sequencing, and Assembly of HIV-1 Genomes

Por Gall, Astrid, Ferns, Bridget, Morris, Clare, Watson, Simon, Cotten, Matthew, Robinson, Mark, Berry, Neil, Pillay, Deenan, Kellam, Paul
Publicado em 2012

Full Genome Virus Detection in Fecal Samples Using Sensitive Nucleic Acid Preparation, Deep Sequencing, and a Novel Iterative Sequence Classification Algorithm

Por Cotten, Matthew, Oude Munnink, Bas, Canuti, Marta, Deijs, Martin, Watson, Simon J., Kellam, Paul, van der Hoek, Lia
Publicado em 2014

Deep Sequencing of Norovirus Genomes Defines Evolutionary Patterns in an Urban Tropical Setting

Por Cotten, Matthew, Petrova, Velislava, Phan, My V. T., Rabaa, Maia A., Watson, Simon J., Ong, Swee Hoe, Kellam, Paul, Baker, Stephen
Publicado em 2014

Using reference-free compressed data structures to analyze sequencing reads from thousands of human genomes

Por Dolle, Dirk D., Liu, Zhicheng, Cotten, Matthew, Simpson, Jared T., Iqbal, Zamin, Durbin, Richard, McCarthy, Shane A., Keane, Thomas M.
Publicado no Genome Res (2017)

Local Evolutionary Patterns of Human Respiratory Syncytial Virus Derived from Whole-Genome Sequencing

Por Agoti, Charles N., Otieno, James R., Munywoki, Patrick K., Mwihuri, Alexander G., Cane, Patricia A., Nokes, D. James, Kellam, Paul, Cotten, Matthew
Publicado no J Virol (2015)

Human Rhinovirus B and C Genomes from Rural Coastal Kenya

Por Agoti, Charles N., Kiyuka, Patience K., Kamau, Everlyn, Munywoki, Patrick K., Bett, Anne, van der Hoek, Lia, Kellam, Paul, Nokes, D. James, Cotten, Matthew
Publicado no Genome Announc (2016)

Community Case Clusters of Middle East Respiratory Syndrome Coronavirus in Hafr Al-Batin, Kingdom of Saudi Arabia: A Descriptive Genomic study

Por Memish, Ziad A., Cotten, Matthew, Watson, Simon J., Kellam, Paul, Zumla, Alimuddin, Alhakeem, Rafat F., Assiri, Abdullah, Rabeeah, Abdullah A. Al, Al-Tawfiq, Jaffar A.
Publicado no Int J Infect Dis (2014)

HIV-1 subtype distribution in the Gambia and the significant presence of CRF49_cpx, a novel circulating recombinant form

Por Foley Brian, Jaye Assan, Onyango Clayton, van Tienen Carla, Trikha Roochi, Hué Stéphane, Turner Roxanne, de Silva Thushan I, Whittle Hilton, Rowland-Jones Sarah L, Cotten Matthew
Publicado em 2010-10-01

Molecular epidemiology of endemic Human T-Lymphotropic virus 1 (HTLV-1) in a community in rural Guinea-Bissau

Por Gonçalves Nato, Vincent Tim, van der Loeff Maarten, Alcantara Luiz C, de Silva Thushan I, van Tienen Carla, Coutinho Roel A, Aaby Peter, Whittle Hilton, Cotten Matthew
Publicado em 2011-06-01

HIV-1 subtype distribution in the Gambia and the significant presence of CRF49_cpx, a novel circulating recombinant form

Por de Silva, Thushan I, Turner, Roxanne, Hué, Stéphane, Trikha, Roochi, van Tienen, Carla, Onyango, Clayton, Jaye, Assan, Foley, Brian, Whittle, Hilton, Rowland-Jones, Sarah L, Cotten, Matthew
Publicado em 2010

Full-Genome Deep Sequencing and Phylogenetic Analysis of Novel Human Betacoronavirus

Por Cotten, Matthew, Lam, Tommy T., Watson, Simon J., Palser, Anne L., Petrova, Velislava, Grant, Paul, Pybus, Oliver G., Rambaut, Andrew, Guan, Yi, Pillay, Deenan, Kellam, Paul, Nastouli, Eleni
Publicado em 2013

Virological Response to Highly Active Antiretroviral Therapy in Patients Infected with Human Immunodeficiency Virus Type 2 (HIV-2) and in Patients Dually Infected with HIV-1 and HI...

Por Jallow, Sabelle, Alabi, Abraham, Sarge-Njie, Ramu, Peterson, Kevin, Whittle, Hilton, Corrah, Tumani, Jaye, Assan, Cotten, Matthew, Vanham, Guido, McConkey, Samuel J., Rowland-Jones, Sarah, Janssens, Wouter
Publicado em 2009

Molecular epidemiology of endemic Human T-Lymphotropic virus 1 (HTLV-1) in a community in rural Guinea-Bissau

Por van Tienen, Carla, de Silva, Thushan I, Alcantara, Luiz C, van der Loeff, Maarten Schim, Vincent, Tim, Gonçalves, Nato, Coutinho, Roel A, Aaby, Peter, Whittle, Hilton, Cotten, Matthew
Publicado em 2011

HTLV-1 and HIV-2 Infection Are Associated with Increased Mortality in a Rural West African Community

Por van Tienen, Carla, Schim van der Loeff, Maarten, Peterson, Ingrid, Cotten, Matthew, Andersson, Sören, Holmgren, Birgitta, Vincent, Tim, de Silva, Thushan, Rowland-Jones, Sarah, Aaby, Peter, Whittle, Hilton
Publicado em 2011

Emergence of HBV resistance to lamivudine (3TC) in HIV/HBV co-infected patients in The Gambia, West Africa

Por Stewart, Balint, Jobarteh, Modou L, Sarge-Njie, Ramu, Alabi, Abraham, de Silva, Thushan, Peterson, Kevin, Peterson, Ingrid, Whittle, Hilton, Rowland-Jones, Sarah, Jaye, Assan, Cotten, Matthew, Mendy, Maimuna
Publicado em 2011

The presence of prolines in the flanking region of an immunodominant HIV‐2 gag epitope influences the quality and quantity of the epitope generated

Por Jallow, Sabelle, Leligdowicz, Aleksandra, Kramer, Holger B., Onyango, Clayton, Cotten, Matthew, Wright, Cynthia, Whittle, Hilton C., McMichael, Andrew, Dong, Tao, Kessler, Benedikt M., Rowland‐Jones, Sarah L.
Publicado no Eur J Immunol (2015)

HTLV-1 in rural Guinea-Bissau: prevalence, incidence and a continued association with HIV between 1990 and 2007

Por van Tienen, Carla, van der Loeff, Maarten F Schim, Peterson, Ingrid, Cotten, Matthew, Holmgren, Birgitta, Andersson, Sören, Vincent, Tim, Sarge-Njie, Ramu, Rowland-Jones, Sarah, Jaye, Assan, Aaby, Peter, Whittle, Hilton
Publicado em 2010