Decoding Cellular Dynamics in Epidermal Growth Factor Signaling Using a New Pathway-Based Integration Approach for Proteomics and Transcriptomics Data

Por Wachter, Astrid, Beißbarth, Tim
Publicado no Front Genet (2016)

Sequential interim analyses of survival data in DNA microarray experiments

Por Leha, Andreas, Beißbarth, Tim, Jung, Klaus
Publicado em 2011

Reporting FDR analogous confidence intervals for the log fold change of differentially expressed genes

Por Jung, Klaus, Friede, Tim, Beißbarth, Tim
Publicado em 2011

A new analysis approach of epidermal growth factor receptor pathway activation patterns provides insights into cetuximab resistance mechanisms in head and neck cancer

Por von der Heyde, Silvia, Beissbarth, Tim
Publicado em 2012

R-Based Software for the Integration of Pathway Data into Bioinformatic Algorithms

Por Kramer, Frank, Bayerlová, Michaela, Beißbarth, Tim
Publicado em 2014

GOSim – an R-package for computation of information theoretic GO similarities between terms and gene products

Por Fröhlich, Holger, Speer, Nora, Poustka, Annemarie, Beißbarth, Tim
Publicado em 2007

Detection of Simultaneous Group Effects in MicroRNA Expression and Related Target Gene Sets

Por Artmann, Stephan, Jung, Klaus, Bleckmann, Annalen, Beißbarth, Tim
Publicado em 2012

Analysis of Reverse Phase Protein Array Data: From Experimental Design towards Targeted Biomarker Discovery

Por Wachter, Astrid, Bernhardt, Stephan, Beissbarth, Tim, Korf, Ulrike
Publicado no Microarrays (Basel) (2015)

Deterministic Effects Propagation Networks for reconstructing protein signaling networks from multiple interventions

Por Bender Christian, Arlt Dorit, Sahin Özgür, Fröhlich Holger, Beißbarth Tim
Publicado em 2009-10-01

Large scale statistical inference of signaling pathways from RNAi and microarray data

Por Froehlich, Holger, Fellmann, Mark, Sueltmann, Holger, Poustka, Annemarie, Beissbarth, Tim
Publicado em 2007

Estimating large-scale signaling networks through nested effect models with intervention effects from microarray data

Por Fröhlich, Holger, Fellmann, Mark, Sültmann, Holger, Poustka, Annemarie, Beissbarth, Tim
Publicado em 2008

Predicting pathway membership via domain signatures

Por Fröhlich, Holger, Fellmann, Mark, Sültmann, Holger, Poustka, Annemarie, Beißbarth, Tim
Publicado em 2008

Deterministic Effects Propagation Networks for reconstructing protein signaling networks from multiple interventions

Por Fröhlich, Holger, Sahin, Özgür, Arlt, Dorit, Bender, Christian, Beißbarth, Tim
Publicado em 2009

Wnt/β-catenin signaling integrates patterning and metabolism of the insect growth zone

Por Oberhofer, Georg, Grossmann, Daniela, Siemanowski, Janna L., Beissbarth, Tim, Bucher, Gregor
Publicado no Development (2014)

Extending pathways based on gene lists using InterPro domain signatures

Por Hahne, Florian, Mehrle, Alexander, Arlt, Dorit, Poustka, Annemarie, Wiemann, Stefan, Beissbarth, Tim
Publicado em 2008

Dynamic deterministic effects propagation networks: learning signalling pathways from longitudinal protein array data

Por Bender, Christian, Henjes, Frauke, Fröhlich, Holger, Wiemann, Stefan, Korf, Ulrike, Beißbarth, Tim
Publicado em 2010

Comparative study on gene set and pathway topology-based enrichment methods

Por Bayerlová, Michaela, Jung, Klaus, Kramer, Frank, Klemm, Florian, Bleckmann, Annalen, Beißbarth, Tim
Publicado no BMC Bioinformatics (2015)

Newly Constructed Network Models of Different WNT Signaling Cascades Applied to Breast Cancer Expression Data

Por Bayerlová, Michaela, Klemm, Florian, Kramer, Frank, Pukrop, Tobias, Beißbarth, Tim, Bleckmann, Annalen
Publicado no PLoS One (2015)

Inferring signalling networks from longitudinal data using sampling based approaches in the R-package 'ddepn'

Por Bender, Christian, Heyde, Silvia vd, Henjes, Frauke, Wiemann, Stefan, Korf, Ulrike, Beißbarth, Tim
Publicado em 2011

Cohesin is required for expression of the estrogen receptor-alpha (ESR1) gene

Por Prenzel, Tanja, Kramer, Frank, Bedi, Upasana, Nagarajan, Sankari, Beissbarth, Tim, Johnsen, Steven A
Publicado em 2012