Inference of the Properties of the Recombination Process from Whole Bacterial Genomes

Autor Ansari, M. Azim, Didelot, Xavier
Vydáno 2014

Bayesian Inference of the Evolution of a Phenotype Distribution on a Phylogenetic Tree

Autor Ansari, M. Azim, Didelot, Xavier
Vydáno v Genetics (2016)

Extensive C->U transition biases in the genomes of a wide range of mammalian RNA viruses; potential associations with transcriptional mutations, damage- or host-mediated editing of...

Autor Simmonds, Peter, Ansari, M. Azim
Vydáno v PLoS Pathog (2021)

Testing for dependence on tree structures

Autor Behr, Merle, Ansari, M. Azim, Munk, Axel, Holmes, Chris
Vydáno v Proc Natl Acad Sci U S A (2020)

Efficient Inference of Recombination Hot Regions in Bacterial Genomes

Autor Yahara, Koji, Didelot, Xavier, Ansari, M. Azim, Sheppard, Samuel K., Falush, Daniel
Vydáno 2014

Interferon lambda 4 variant rs12979860 is not associated with RAV NS5A Y93H in hepatitis C virus genotype 3a

Autor Pedergnana, Vincent, Smith, David, Klenerman, Paul, Barnes, Eleanor, Spencer, Chris C. A., Ansari, M. Azim
Vydáno v Hepatology (2016)

Analysis of genomic-length HBV sequences to determine genotype and subgenotype reference sequences

Autor McNaughton, Anna L., Revill, Peter A., Littlejohn, Margaret, Matthews, Philippa C., Ansari, M. Azim
Vydáno v J Gen Virol (2020)

Impact of virus subtype and host IFNL4 genotype on large-scale RNA structure formation in the genome of hepatitis C virus

Autor Simmonds, Peter, Cuypers, Lize, Irving, Will L., McLauchlan, John, Cooke, Graham S., Barnes, Ellie, Ansari, M. Azim
Vydáno v RNA (2020)

ve-SEQ: Robust, unbiased enrichment for streamlined detection and whole-genome sequencing of HCV and other highly diverse pathogens

Autor Bonsall, David, Ansari, M. Azim, Ip, Camilla, Trebes, Amy, Brown, Anthony, Klenerman, Paul, Buck, David, Piazza, Paolo, Barnes, Eleanor, Bowden, Rory
Vydáno v F1000Res (2015)

Evolutionary dynamics of Enterococcus faecium reveals complex genomic relationships between isolates with independent emergence of vancomycin resistance

Autor van Hal, Sebastiaan J., Ip, Camilla L. C., Ansari, M. Azim, Wilson, Daniel J., Espedido, Bjorn A., Jensen, Slade O., Bowden, Rory
Vydáno v Microb Genom (2016)

Impact of Interferon Lambda 4 Genotype on Interferon‐Stimulated Gene Expression During Direct‐Acting Antiviral Therapy for Hepatitis C

Autor Ramamurthy, Narayan, Marchi, Emanuele, Ansari, M. Azim, Pedergnana, Vincent, Mclean, Angela, Hudson, Emma, Bowden, Rory, Spencer, Chris C.A., Barnes, Eleanor, Klenerman, Paul
Vydáno v Hepatology (2018)

Insights From Deep Sequencing of the HBV Genome—Unique, Tiny, and Misunderstood

Autor McNaughton, Anna L., D’Arienzo, Valentina, Ansari, M. Azim, Lumley, Sheila F., Littlejohn, Margaret, Revill, Peter, McKeating, Jane A., Matthews, Philippa C.
Vydáno v Gastroenterology (2019)

Changes in the prevalence of hepatitis B and C viral infections in Sindh province, Pakistan: Findings from two sero-surveys in 2007 and 2019

Autor Alamneh, Tesfa Sewunet, Walker, Josephine G., Lim, Aaron G., Alam, Ejaz, Hamid, Saeed, Foster, Graham R., Choudhry, Naheed, Ansari, M. Azim, Qureshi, Huma, Vickerman, Peter
Vydáno v J Viral Hepat (2024)

Case Report: Application of hepatitis B virus (HBV) deep sequencing to distinguish between acute and chronic infection

Autor Downs, Louise O., McNaughton, Anna L., de Cesare, Mariateresa, Ansari, M. Azim, Martin, Jacqueline, Woodrow, Charles, Bowden, Rory, Collier, Jane, Barnes, Eleanor, Matthews, Philippa C.
Vydáno v Wellcome Open Res (2021)

Resistance analysis of genotype 3 hepatitis C virus indicates subtypes inherently resistant to nonstructural protein 5A inhibitors

Autor Smith, David, Magri, Andrea, Bonsall, David, Ip, Camilla L.C., Trebes, Amy, Brown, Anthony, Piazza, Palo, Bowden, Rory, Nguyen, Dung, Ansari, M. Azim, Simmonds, Peter, Barnes, Eleanor
Vydáno v Hepatology (2018)

The Design and Development of a Multi-HBV Antigen Encoded in Chimpanzee Adenoviral and Modified Vaccinia Ankara Viral Vectors; A Novel Therapeutic Vaccine Strategy against HBV

Autor Chinnakannan, Senthil K., Cargill, Tamsin N., Donnison, Timothy A., Ansari, M. Azim, Sebastian, Sarah, Lee, Lian Ni, Hutchings, Claire, Klenerman, Paul, Maini, Mala K., Evans, Tom, Barnes, Eleanor
Vydáno v Vaccines (Basel) (2020)

Epstein-Barr virus reactivation in sepsis due to community-acquired pneumonia is associated with increased morbidity and an immunosuppressed host transcriptomic endotype

Autor Goh, Cyndi, Burnham, Katie L., Ansari, M. Azim, de Cesare, Mariateresa, Golubchik, Tanya, Hutton, Paula, Overend, Lauren E., Davenport, Emma E., Hinds, Charles J., Bowden, Rory, Knight, Julian C.
Vydáno v Sci Rep (2020)

Technical Validation of a Hepatitis C Virus Whole Genome Sequencing Assay for Detection of Genotype and Antiviral Resistance in the Clinical Pathway

Autor Manso, Carmen F., Bibby, David F., Lythgow, Kieren, Mohamed, Hodan, Myers, Richard, Williams, David, Piorkowska, Renata, Chan, Yuen T., Bowden, Rory, Ansari, M. Azim, Ip, Camilla L. C., Barnes, Eleanor, Bradshaw, Daniel, Mbisa, Jean L.
Vydáno v Front Microbiol (2020)

HBV vaccination and PMTCT as elimination tools in the presence of HIV: insights from a clinical cohort and dynamic model

Autor McNaughton, Anna L., Lourenço, José, Hattingh, Louise, Adland, Emily, Daniels, Samantha, Van Zyl, Anriette, Akiror, Connie S., Wareing, Susan, Jeffery, Katie, Ansari, M. Azim, Klenerman, Paul, Goulder, Philip J. R., Gupta, Sunetra, Jooste, Pieter, Matthews, Philippa C.
Vydáno v BMC Med (2019)

Illumina and Nanopore methods for whole genome sequencing of hepatitis B virus (HBV)

Autor McNaughton, Anna L., Roberts, Hannah E., Bonsall, David, de Cesare, Mariateresa, Mokaya, Jolynne, Lumley, Sheila F., Golubchik, Tanya, Piazza, Paolo, Martin, Jacqueline B., de Lara, Catherine, Brown, Anthony, Ansari, M. Azim, Bowden, Rory, Barnes, Eleanor, Matthews, Philippa C.
Vydáno v Sci Rep (2019)