5-Hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells

by Stroud, Hume, Feng, Suhua, Morey Kinney, Shannon, Pradhan, Sriharsa, Jacobsen, Steven E
Published 2011

Genome-wide analysis of histone H3.1 and H3.3 variants in Arabidopsis thaliana

by Stroud, Hume, Otero, Sofía, Desvoyes, Bénédicte, Ramírez-Parra, Elena, Jacobsen, Steven E., Gutierrez, Crisanto
Published 2012

Comprehensive Analysis of Silencing Mutants Reveals Complex Regulation of the Arabidopsis Methylome

by Stroud, Hume, Greenberg, Maxim V.C., Feng, Suhua, Bernatavichute, Yana V., Jacobsen, Steven E.
Published 2013

Loss of the DNA Methyltransferase MET1 Induces H3K9 Hypermethylation at PcG Target Genes and Redistribution of H3K27 Trimethylation to Transposons in Arabidopsis thaliana

by Deleris, Angelique, Stroud, Hume, Bernatavichute, Yana, Johnson, Elizabeth, Klein, Gregor, Schubert, Daniel, Jacobsen, Steven E.
Published 2012

DNA Methyltransferases Are Required to Induce Heterochromatic Re-Replication in Arabidopsis

by Stroud, Hume, Hale, Christopher J., Feng, Suhua, Caro, Elena, Jacob, Yannick, Michaels, Scott D., Jacobsen, Steven E.
Published 2012

Histone methyltransferases regulating rRNA gene dose and dosage control in Arabidopsis

by Pontvianne, Frédéric, Blevins, Todd, Chandrasekhara, Chinmayi, Feng, Wei, Stroud, Hume, Jacobsen, Steven E., Michaels, Scott D., Pikaard, Craig S.
Published 2012

The roles of non-CG methylation in Arabidopsis

by Stroud, Hume, Do, Truman, Du, Jiamu, Zhong, Xuehua, Feng, Suhua, Johnson, Lianna, Patel, Dinshaw J., Jacobsen, Steven E.
Published 2013

SNF2 chromatin remodeler-family proteins FRG1 and -2 are required for RNA-directed DNA methylation

by Groth, Martin, Stroud, Hume, Feng, Suhua, Greenberg, Maxim V. C., Vashisht, Ajay A., Wohlschlegel, James A., Jacobsen, Steven E., Ausin, Israel
Published in Proc Natl Acad Sci U S A (2014)

Plants regenerated from tissue culture contain stable epigenome changes in rice

by Stroud, Hume, Ding, Bo, Simon, Stacey A, Feng, Suhua, Bellizzi, Maria, Pellegrini, Matteo, Wang, Guo-Liang, Meyers, Blake C, Jacobsen, Steven E
Published 2013

Regulation of heterochromatic DNA replication by histone H3 lysine 27 methyltransferases

by Jacob, Yannick, Stroud, Hume, LeBlanc, Chantal, Feng, Suhua, Zhou, Luting, Caro, Elena, Hassel, Christiane, Gutierrez, Crisanto, Michaels, Scott D., Jacobsen, Steven E.
Published 2010

Tissue-specific Distribution and Dynamic Changes of 5-Hydroxymethylcytosine in Mammalian Genomes

by Kinney, Shannon Morey, Chin, Hang Gyeong, Vaisvila, Romualdas, Bitinaite, Jurate, Zheng, Yu, Estève, Pierre-Olivier, Feng, Suhua, Stroud, Hume, Jacobsen, Steven E., Pradhan, Sriharsa
Published 2011

ATXR5 and ATXR6 are novel H3K27 monomethyltransferases required for chromatin structure and gene silencing

by Jacob, Yannick, Feng, Suhua, LeBlanc, Chantal A., Bernatavichute, Yana V., Stroud, Hume, Cokus, Shawn, Johnson, Lianna M., Pellegrini, Matteo, Jacobsen, Steven E., Michaels, Scott D.
Published 2009

Transcriptional gene silencing by Arabidopsis microrchidia homologues involves the formation of heteromers

by Moissiard, Guillaume, Bischof, Sylvain, Husmann, Dylan, Pastor, William A., Hale, Christopher J., Yen, Linda, Stroud, Hume, Papikian, Ashot, Vashisht, Ajay A., Wohlschlegel, James A., Jacobsen, Steven E.
Published 2014

The histone H3 variant H3.3 regulates gene body DNA methylation in Arabidopsis thaliana

by Wollmann, Heike, Stroud, Hume, Yelagandula, Ramesh, Tarutani, Yoshiaki, Jiang, Danhua, Jing, Li, Jamge, Bhagyshree, Takeuchi, Hidenori, Holec, Sarah, Nie, Xin, Kakutani, Tetsuji, Jacobsen, Steven E., Berger, Frédéric
Published in Genome Biol (2017)

The Histone Variant H2A.W Defines Heterochromatin and Promotes Chromatin Condensation in Arabidopsis

by Yelagandula, Ramesh, Stroud, Hume, Holec, Sarah, Zhou, Keda, Feng, Suhua, Zhong, Xuehua, Muthurajan, Uma M., Nie, Xin, Kawashima, Tomokazu, Groth, Martin, Luger, Karolin, Jacobsen, Steven E., Berger, Frédéric
Published in Cell (2014)

Genome-wide mapping of Arabidopsis origins of DNA replication and their associated epigenetic marks

by Costas, Celina, de la Paz Sanchez, Maria, Stroud, Hume, Yu, Yanchun, Oliveros, Juan Carlos, Feng, Suhua, Benguria, Alberto, López-Vidriero, Irene, Zhang, Xiaoyu, Solano, Roberto, Jacobsen, Steven E., Gutierrez, Crisanto
Published 2011

MORC1 represses transposable elements in the mouse male germline

by Pastor, William A., Stroud, Hume, Nee, Kevin, Liu, Wanlu, Pezic, Dubravka, Manakov, Sergei, Lee, Serena A., Moissiard, Guillaume, Zamudio, Natasha, Bourc’his, Déborah, Aravin, Alexei A., Clark, Amander T., Jacobsen, Steven E.
Published in Nat Commun (2014)

Erratum: MORC1 represses transposable elements in the mouse male germline

by Pastor, William A., Stroud, Hume, Nee, Kevin, Liu, Wanlu, Pezic, Dubravka, Manakov, Sergei, Lee, Serena A., Moissiard, Guillaume, Zamudio, Natasha, Bourc’his, Déborah, Aravin, Alexei A., Clark, Amander T., Jacobsen, Steven E.
Published in Nat Commun (2015)

RNA interference knockdown of DNA methyl-transferase 3 affects gene alternative splicing in the honey bee

by Li-Byarlay, Hongmei, Li, Yang, Stroud, Hume, Feng, Suhua, Newman, Thomas C., Kaneda, Megan, Hou, Kirk K., Worley, Kim C., Elsik, Christine G., Wickline, Samuel A., Jacobsen, Steven E., Ma, Jian, Robinson, Gene E.
Published 2013

Dual Binding of Chromomethylase Domains to H3K9me2-containing Nucleosomes Directs DNA Methylation in Plants

by Du, Jiamu, Zhong, Xuehua, Bernatavichute, Yana V., Stroud, Hume, Feng, Suhua, Caro, Elena, Vashisht, Ajay A., Terragni, Jolyon, Chin, Hang Gyeong, Tu, Andy, Hetzel, Jonathan, Wohlschlegel, James A., Pradhan, Sriharsa, Patel, Dinshaw J., Jacobsen, Steven E.
Published 2012