Epigenetic modifications in plants: an evolutionary perspective

by Feng, Suhua, Jacobsen, Steven E
Published 2011

Epigenetic reprogramming in plant and animal development

by Feng, Suhua, Jacobsen, Steven E., Reik, Wolf
Published 2010

Epigenetic differences between shoots and roots in Arabidopsis reveals tissue-specific regulation

by Widman, Nicolas, Feng, Suhua, Jacobsen, Steven E, Pellegrini, Matteo
Published 2014

Efficient and accurate determination of genome-wide DNA methylation patterns in Arabidopsis thaliana with enzymatic methyl sequencing

by Feng, Suhua, Zhong, Zhenhui, Wang, Ming, Jacobsen, Steven E.
Published in Epigenetics Chromatin (2020)

5-Hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells

by Stroud, Hume, Feng, Suhua, Morey Kinney, Shannon, Pradhan, Sriharsa, Jacobsen, Steven E
Published 2011

CRISPR-based targeting of DNA methylation in Arabidopsis thaliana by a bacterial CG-specific DNA methyltransferase

by Ghoshal, Basudev, Picard, Colette L., Vong, Brandon, Feng, Suhua, Jacobsen, Steven E.
Published in Proc Natl Acad Sci U S A (2021)

Comprehensive Analysis of Silencing Mutants Reveals Complex Regulation of the Arabidopsis Methylome

by Stroud, Hume, Greenberg, Maxim V.C., Feng, Suhua, Bernatavichute, Yana V., Jacobsen, Steven E.
Published 2013

Genome-wide Hi-C analyses in wild type and mutants reveal high-resolution chromatin interactions in Arabidopsis

by Feng, Suhua, Cokus, Shawn J., Schubert, Veit, Zhai, Jixian, Pellegrini, Matteo, Jacobsen, Steven E.
Published in Mol Cell (2014)

A viral guide RNA delivery system for CRISPR-based transcriptional activation and heritable targeted DNA demethylation in Arabidopsis thaliana

by Ghoshal, Basudev, Vong, Brandon, Picard, Colette L., Feng, Suhua, Tam, Janet M., Jacobsen, Steven E.
Published in PLoS Genet (2020)

DNA methylation dynamics, metabolic fluxes, gene splicing, and alternative phenotypes in honey bees

by Foret, Sylvain, Kucharski, Robert, Pellegrini, Matteo, Feng, Suhua, Jacobsen, Steven E., Robinson, Gene E., Maleszka, Ryszard
Published 2012

Interplay between Active Chromatin Marks and RNA-Directed DNA Methylation in Arabidopsis thaliana

by Greenberg, Maxim V. C., Deleris, Angelique, Hale, Christopher J., Liu, Ao, Feng, Suhua, Jacobsen, Steven E.
Published 2013

DNA Methyltransferases Are Required to Induce Heterochromatic Re-Replication in Arabidopsis

by Stroud, Hume, Hale, Christopher J., Feng, Suhua, Caro, Elena, Jacob, Yannick, Michaels, Scott D., Jacobsen, Steven E.
Published 2012

Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by Aid deficiency

by Popp, Christian, Dean, Wendy, Feng, Suhua, Cokus, Shawn J., Andrews, Simon, Pellegrini, Matteo, Jacobsen, Steven E., Reik, Wolf
Published 2010

DDR complex facilitates global association of RNA Polymerase V to promoters and evolutionarily young transposons

by Zhong, Xuehua, Hale, Christopher J., Law, Julie A., Johnson, Lianna M., Feng, Suhua, Tu, Andy, Jacobsen, Steven E.
Published 2012

The roles of non-CG methylation in Arabidopsis

by Stroud, Hume, Do, Truman, Du, Jiamu, Zhong, Xuehua, Feng, Suhua, Johnson, Lianna, Patel, Dinshaw J., Jacobsen, Steven E.
Published 2013

A kinesin Klp10A mediates cell cycle-dependent shuttling of Piwi between nucleus and nuage

by Venkei, Zsolt G., Choi, Charlotte P., Feng, Suhua, Chen, Cuie, Jacobsen, Steven E., Kim, John K., Yamashita, Yukiko M.
Published in PLoS Genet (2020)

DNA methylation-linked chromatin accessibility affects genomic architecture in Arabidopsis

by Zhong, Zhenhui, Feng, Suhua, Duttke, Sascha H., Potok, Magdalena E., Zhang, Yiwei, Gallego-Bartolomé, Javier, Liu, Wanlu, Jacobsen, Steven E.
Published in Proc Natl Acad Sci U S A (2021)

SNF2 chromatin remodeler-family proteins FRG1 and -2 are required for RNA-directed DNA methylation

by Groth, Martin, Stroud, Hume, Feng, Suhua, Greenberg, Maxim V. C., Vashisht, Ajay A., Wohlschlegel, James A., Jacobsen, Steven E., Ausin, Israel
Published in Proc Natl Acad Sci U S A (2014)

Plants regenerated from tissue culture contain stable epigenome changes in rice

by Stroud, Hume, Ding, Bo, Simon, Stacey A, Feng, Suhua, Bellizzi, Maria, Pellegrini, Matteo, Wang, Guo-Liang, Meyers, Blake C, Jacobsen, Steven E
Published 2013

NAP1-RELATED PROTEIN1 and 2 negatively regulate H2A.Z abundance in chromatin in Arabidopsis

by Wang, Yafei, Zhong, Zhenhui, Zhang, Yaxin, Xu, Linhao, Feng, Suhua, Rayatpisheh, Shima, Wohlschlegel, James A., Wang, Zonghua, Jacobsen, Steven E., Ausin, Israel
Published in Nat Commun (2020)